STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CSD0Xylose isomerase. (407 aa)    
Predicted Functional Partners:
A0A1Y2BWE6
Actin-like ATPase domain-containing protein.
  
 
 0.917
A0A1Y2BUZ4
Uncharacterized protein.
     
 0.868
A0A1Y2CPL9
Ubiquitin-like domain-containing protein; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.844
A0A1Y2C8Q2
Glycoside hydrolase.
    
 0.815
A0A1Y2CWH3
NAD(P)-binding protein.
    
 0.808
A0A1Y2CUK0
UDP-glucose 6-dehydrogenase.
     
 0.798
A0A1Y2C8L0
Glycoside hydrolase.
    
 0.778
A0A1Y2CNB4
NAD(P)-binding protein.
    
 0.742
A0A1Y2CWQ7
NAD(P)-binding protein.
    
 0.742
A0A1Y2BQS6
Glycoside hydrolase; Belongs to the glycosyl hydrolase 1 family.
    
 0.739
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.