STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CSM3S4 RNA-binding domain-containing protein. (356 aa)    
Predicted Functional Partners:
NCS6
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation.
  
 0.893
A0A1Y2BDU0
Cytidine deaminase-like protein.
  
 0.865
A0A1Y2C114
Cytidine deaminase-like protein.
  
 0.865
A0A1Y2CWW2
Pseudouridine synthase.
  
 
 0.857
A0A1Y2CG09
DUF143-domain-containing protein.
  
 
 0.856
A0A1Y2BZP6
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.854
A0A1Y2BD66
RibD_C domain-containing protein.
  
 
 0.815
A0A1Y2BMI2
Bacterial bifunctional deaminase-reductase.
  
 
 0.815
A0A1Y2CH36
Ribokinase-like protein.
  
 
 0.815
A0A1Y2AYE0
PfkB domain-containing protein.
  
 
 0.803
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.