STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CSP3SET domain-containing protein. (420 aa)    
Predicted Functional Partners:
A0A1Y2C8M2
Uncharacterized protein.
    
 0.991
A0A1Y2CIS2
Uncharacterized protein.
   
 0.893
A0A1Y2CNQ1
Uncharacterized protein.
    
 0.892
A0A1Y2B3R1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.891
A0A1Y2BSF7
Uncharacterized protein.
    
 0.891
A0A1Y2CD25
TFIID-18kDa-domain-containing protein.
    
 0.868
A0A1Y2C254
DUF1325-domain-containing protein.
    
 0.867
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.861
A0A1Y2CHS0
DUF1546-domain-containing protein.
    
 0.848
A0A1Y2BWK2
Cysteine proteinase; Belongs to the peptidase C19 family.
    
 0.812
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.