STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CU75TPR-like protein. (507 aa)    
Predicted Functional Partners:
A0A1Y2CYD5
Nudix hydrolase domain-containing protein.
   
  0.706
A0A1Y2D1Z7
CDC73-domain-containing protein.
    
 0.684
A0A1Y2BX26
TPR-like protein.
    
 0.683
A0A1Y2C9U9
Leo1-domain-containing protein.
    
 0.682
A0A1Y2BEK1
APC1_C domain-containing protein.
    
 0.678
A0A1Y2D061
Uncharacterized protein.
    
 0.677
A0A1Y2CVU5
ANAPC5 domain-containing protein.
    
 0.676
A0A1Y2BR35
Endoplasmin-like protein.
  
 0.675
A0A1Y2C4B0
Uncharacterized protein.
    
 0.675
A0A1Y2CEF2
Uncharacterized protein.
    
 0.675
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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