STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CVC7Metallo-dependent phosphatase. (302 aa)    
Predicted Functional Partners:
A0A1Y2CBF0
Guanylate kinase-like domain-containing protein.
  
 0.862
A0A1Y2CXY2
Cleavage and polyadenylation specificity factor 3, isoform CRA_b.
 
 
 0.840
A0A1Y2CBL2
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.833
A0A1Y2CF92
Ankyrin.
  
 0.832
A0A1Y2CSS1
WD40 repeat-like protein.
    
 0.824
A0A1Y2CNK3
Ssu72-domain-containing protein.
    
 0.819
A0A1Y2C063
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
 0.813
A0A1Y2CVL9
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.801
A0A1Y2CUN7
CPSF_A domain-containing protein.
    
 0.799
A0A1Y2BD21
S1 motif domain-containing protein.
   
 0.796
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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