STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CVK5WD40 repeat-like protein. (1220 aa)    
Predicted Functional Partners:
A0A1Y2D2W4
RING/U-box.
    
 0.993
A0A1Y2CVL5
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.977
A0A1Y2BYZ1
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.976
A0A1Y2B1L5
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
 0.955
A0A1Y2CZ35
Ubiquitin-protein ligase; Belongs to the SKP1 family.
    
 0.955
A0A1Y2CZ50
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
 0.955
A0A1Y2CRT3
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.921
A0A1Y2CWJ5
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.897
A0A1Y2CNK9
Uncharacterized protein.
    
  0.869
A0A1Y2CLY8
Uncharacterized protein.
    
 0.860
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.