STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CW26Periplasmic binding protein-like I. (473 aa)    
Predicted Functional Partners:
A0A1Y2B4Y8
Guanine nucleotide-binding protein, beta subunit.
    
 0.590
A0A1Y2BUE8
Uncharacterized protein.
   
 0.583
A0A1Y2C4V7
Uncharacterized protein.
    
 0.514
A0A1Y2CGA7
Uncharacterized protein.
    
 0.514
A0A1Y2CS05
Uncharacterized protein.
    
 0.514
A0A1Y2D2X6
Uncharacterized protein.
    
 
 0.429
A0A1Y2C385
Guanine nucleotide binding protein, alpha subunit.
    
 0.427
A0A1Y2CXG7
G-alpha-domain-containing protein.
    
 0.427
A0A1Y2CHR5
CaMKII_AD domain-containing protein.
    
  0.409
A0A1Y2CZB6
Calcium/calmodulin dependent protein kinase II, association-domain-containing protein.
    
  0.409
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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