STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CWI4Beta_elim_lyase domain-containing protein. (371 aa)    
Predicted Functional Partners:
A0A1Y2CNN2
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 0.900
A0A1Y2C8X1
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.887
A0A1Y2CCL8
PLP-dependent transferase.
    
 0.885
A0A1Y2CY96
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 0.882
A0A1Y2C848
Homoserine kinase.
    
 0.852
A0A1Y2CDG4
PLP-dependent transferase.
  
 
 0.831
A0A1Y2C6D6
2-amino-3-ketobutyrate coenzyme A ligase.
  
 
 0.821
A0A1Y2D2F8
Phosphoserine phosphatase serb.
    
 0.821
A0A1Y2CK47
PLP-dependent transferase.
  
 
 0.819
A0A1Y2C674
Threonine dehydratase.
  
 
 0.818
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.