STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CWJ3Uncharacterized protein. (652 aa)    
Predicted Functional Partners:
A0A1Y2D2S4
HECT domain-containing protein.
   
 0.906
A0A1Y2C126
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.839
A0A1Y2CYK4
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.835
A0A1Y2CNK9
Uncharacterized protein.
   
 0.822
A0A1Y2AYD1
UBC-like protein.
   
 0.801
A0A1Y2BDV6
Ubiquitin-domain-containing protein.
    
 0.775
A0A1Y2CGN6
Ubiquitin-domain-containing protein.
    
 0.775
A0A1Y2C8S4
WD40 repeat-like protein.
    
 0.762
A0A1Y2BRV5
E2_bind domain-containing protein.
   
 0.716
A0A1Y2BPS3
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
   
 0.713
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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