STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CWT6Uncharacterized protein. (394 aa)    
Predicted Functional Partners:
A0A1Y2CVN9
MI domain-containing protein.
   
 0.798
A0A1Y2CJG4
RNA-binding domain-containing protein.
   
 0.793
A0A1Y2BNI7
Putative eukaryotic initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.779
A0A1Y2BHG2
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
   
 0.712
A0A1Y2BX74
Small nuclear ribonucleoprotein Sm D3.
   
 0.698
A0A1Y2CH03
RRM domain-containing protein.
  
 0.691
A0A1Y2AUQ6
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
0.687
A0A1Y2BKC2
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
0.687
A0A1Y2BD21
S1 motif domain-containing protein.
   
 0.679
A0A1Y2D5G5
Secretion chaperone CsaA.
    
 0.664
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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