STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CWW9Uncharacterized protein. (446 aa)    
Predicted Functional Partners:
A0A1Y2CZE5
Enkurin domain-containing protein.
  
 
 0.843
A0A1Y2CQ90
Uncharacterized protein.
   
   0.788
A0A1Y2CAW6
Uncharacterized protein.
  
 
 0.774
A0A1Y2BQ94
Uncharacterized protein.
  
 
 0.744
A0A1Y2CSH7
Uncharacterized protein.
  
 
 0.686
A0A1Y2C8W9
RIB43A-domain-containing protein.
  
 
 0.673
A0A1Y2BN68
DUF667-domain-containing protein.
    
 
 0.597
A0A1Y2BZ06
DUF667 domain-containing protein.
    
 
 0.597
A0A1Y2C247
Uncharacterized protein.
    
 
 0.597
A0A1Y2BYM5
Uncharacterized protein.
    
 
 0.560
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.