STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CWX8Phosphoribosyl pyrophosphokinase. (343 aa)    
Predicted Functional Partners:
A0A1Y2CC04
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.855
A0A1Y2CIG1
Thiamin diphosphate-binding protein.
  
 0.855
A0A1Y2D179
Uncharacterized protein.
  
 0.855
A0A1Y2CSQ7
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 
 0.819
A0A1Y2CF63
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.807
A0A1Y2BZE6
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.806
A0A1Y2CH36
Ribokinase-like protein.
   
 0.795
A0A1Y2CUV4
Uncharacterized protein; Belongs to the phosphohexose mutase family.
  
 0.793
A0A1Y2D114
Amidophosphoribosyltransferase.
  
 0.783
A0A1Y2CLC7
ATP phosphoribosyltransferase.
  
 
 0.774
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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