STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CY61Alpha/beta-hydrolase. (281 aa)    
Predicted Functional Partners:
A0A1Y2CZD3
Tryptophan synthase.
    
 0.791
A0A1Y2CBZ0
Epoxide hydrolase.
  
 
 0.755
A0A1Y2CJE2
IGPS-domain-containing protein.
   
 0.688
A0A1Y2C5K5
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.680
A0A1Y2BV67
ARM repeat-containing protein.
    
 0.623
A0A1Y2CTX3
Uncharacterized protein.
    
 0.623
A0A1Y2CZ09
ARM repeat-containing protein.
    
 0.623
A0A1Y2BS98
Short chain dehydrogenase.
  
 0.597
A0A1Y2CBL2
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.587
A0A1Y2CBF0
Guanylate kinase-like domain-containing protein.
  
 0.578
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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