STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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[Homology]
Score
A0A1Y2CY882-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2; Belongs to the DPH1/DPH2 family. DPH2 subfamily. (346 aa)    
Predicted Functional Partners:
A0A1Y2CTF9
Diphthamide biosynthesis protein 1.
   
 0.999
A0A1Y2D3F9
Diphthine synthase.
   
 0.892
A0A1Y2AWW8
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.877
A0A1Y2BVJ9
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.877
MEF1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
    
 0.821
A0A1Y2CAN6
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.821
A0A1Y2CTL0
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.821
A0A1Y2CJ30
RNA helicase.
   
   0.755
A0A1Y2D0G4
WD40 repeat-like protein.
   
    0.726
A0A1Y2D3K2
Uncharacterized protein.
   
 
  0.618
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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