STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CYS3Uncharacterized protein. (946 aa)    
Predicted Functional Partners:
A0A1Y2CYK4
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.969
A0A1Y2D032
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.688
A0A1Y2BRX5
Uncharacterized protein.
    
 0.647
A0A1Y2CEH9
dUTP diphosphatase.
    
 0.647
A0A1Y2C0N4
SAS-6_N domain-containing protein.
    
 0.646
A0A1Y2CY94
OB domain-containing protein.
    
 0.646
A0A1Y2CZD1
Nucleic acid-binding protein.
    
 0.646
A0A1Y2CNF1
WD40 repeat-like protein.
    
 0.617
A0A1Y2CNP9
WD40 repeat-like protein.
    
 0.617
A0A1Y2BFD7
RB_B domain-containing protein.
    
 0.613
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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