STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CZH2TsaA-like domain-containing protein. (475 aa)    
Predicted Functional Partners:
A0A1Y2BY28
Deoxythymidylate kinase, isoform CRA_b.
    
  0.709
A0A1Y2CH16
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
  0.702
A0A1Y2AV09
Triosephosphate isomerase.
    
  0.632
A0A1Y2B3V3
Triosephosphate isomerase.
    
  0.632
A0A1Y2BZP6
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
    
  0.632
A0A1Y2C1V0
Thymidylate synthase.
    
  0.631
A0A1Y2CA33
CMP/dCMP-type deaminase domain-containing protein.
  
 
  0.575
A0A1Y2CJP6
CMP/dCMP-type deaminase domain-containing protein.
  
 
  0.559
A0A1Y2CN26
CMP/dCMP-type deaminase domain-containing protein.
  
 
  0.559
A0A1Y2CBZ0
Epoxide hydrolase.
  
 
  0.454
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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