STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D0R1Flavo protein WrbA. (201 aa)    
Predicted Functional Partners:
A0A1Y2C8J4
TPR_REGION domain-containing protein.
  
 
 0.811
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
     
 0.632
A0A1Y2C8L0
Glycoside hydrolase.
     
 0.632
A0A1Y2C8Q2
Glycoside hydrolase.
     
 0.632
A0A1Y2CSG8
S-adenosyl-L-methionine-dependent methyltransferase.
     
 0.632
A0A1Y2CQ63
Riboflavin kinase.
    
  0.630
A0A1Y2D0C6
Uncharacterized protein.
    
  0.630
A0A1Y2BN59
Argininosuccinate synthase.
  
 
 0.522
A0A1Y2BEE6
Argininosuccinate lyase.
    
 0.500
A0A1Y2C0L4
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.481
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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