STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D0Z0Krr1-domain-containing protein. (726 aa)    
Predicted Functional Partners:
A0A1Y2B2C8
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.991
A0A1Y2BUC3
POP1-domain-containing protein.
   
  0.972
A0A1Y2CFK1
PHP domain-like protein.
   
  0.970
A0A1Y2BVV3
Ribonuclease P protein subunit.
   
  0.969
A0A1Y2C000
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
   
 0.968
A0A1Y2CDQ2
Uncharacterized protein.
   
  0.954
A0A1Y2BFF9
Utp14-domain-containing protein.
   
 
 0.915
A0A1Y2BRQ1
Sas10 domain-containing protein.
   
  
 0.910
A0A1Y2CUS4
rRNA-processing protein UTP23.
   
 
 0.887
A0A1Y2BCF9
Nop14-like protein.
   
 
 0.886
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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