STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D0Z9Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (418 aa)    
Predicted Functional Partners:
A0A1Y2C6D2
Ornithine aminotransferase.
 
 0.884
A0A1Y2CEZ6
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 0.879
A0A1Y2BT73
Glutamate 5-kinase.
    
 0.869
A0A1Y2CY96
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 
 0.868
A0A1Y2D0G8
Gamma-glutamyl phosphate reductase.
    
 0.866
A0A1Y2CZD3
Tryptophan synthase.
  
 
 0.854
A0A1Y2CF07
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
  
 
 0.849
A0A1Y2C2X3
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.848
A0A1Y2CA29
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.846
A0A1Y2BZ59
2-oxoglutarate dehydrogenase, E1 component.
  
 
 0.834
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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