STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D1H3Frataxin. (139 aa)    
Predicted Functional Partners:
A0A1Y2CFX3
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
    
 0.999
A0A1Y2BSE8
Cysteine desulfurase.
   
 0.998
A0A1Y2BSV6
Iron-sulfur cluster biosynthesis protein Isd11; Belongs to the complex I LYR family.
    
 0.998
A0A1Y2BD30
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.939
A0A1Y2D3I8
Ferredoxin.
     
 0.869
A0A1Y2AGG2
Cysteine desulfurase-like protein.
   
 0.848
A0A1Y2B333
Uncharacterized protein.
   
 0.844
A0A1Y2B356
Uncharacterized protein.
   
 0.844
A0A1Y2B3C8
Uncharacterized protein.
   
 0.844
A0A1Y2B429
Aminotran_5 domain-containing protein.
   
 0.844
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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