STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D1M3S-adenosyl-L-methionine-dependent methyltransferase. (242 aa)    
Predicted Functional Partners:
TSR3
Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family.
 
 
  
 0.868
A0A1Y2CX69
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
 
  
 0.828
A0A1Y2D2S4
HECT domain-containing protein.
    
   0.503
A0A1Y2C479
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.480
A0A1Y2C7M5
Uncharacterized protein.
    
 
 0.439
A0A1Y2CG22
SWIB domain-containing protein.
 
      0.436
A0A1Y2B3Z6
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
 
  
   0.417
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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