STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D378PUA domain-containing protein. (509 aa)    
Predicted Functional Partners:
A0A1Y2BNM5
WD40 repeat-like protein.
    
   0.849
A0A1Y2BQA7
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
    
   0.830
A0A1Y2BV29
Ribosomal protein S3.
    
 
 0.821
A0A1Y2CDR6
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
 
 0.756
A0A1Y2D0G8
Gamma-glutamyl phosphate reductase.
    
  0.755
A0A1Y2BRD4
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
 
 0.749
A0A1Y2BP28
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.747
A0A1Y2C5L8
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
   0.747
A0A1Y2CUH8
Putative 40s ribosomal protein s20.
    
   0.747
A0A1Y2D3B6
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.747
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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