STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D3D4Sterol desaturase; Belongs to the sterol desaturase family. (247 aa)    
Predicted Functional Partners:
A0A1Y2CSN8
Lathosterol oxidase-like protein; Belongs to the sterol desaturase family.
   
 0.993
A0A1Y2CQL8
Cytochrome P450; Belongs to the cytochrome P450 family.
   
 0.989
A0A1Y2CL48
3beta-hydroxysteroid dehydrogenase.
  
 0.979
A0A1Y2BZ87
SE-domain-containing protein.
   
 
 0.978
A0A1Y2C238
Uncharacterized protein.
   
 0.977
A0A1Y2C6R6
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.952
A0A1Y2BKV2
Cytochrome P450; Belongs to the cytochrome P450 family.
   
 0.951
A0A1Y2CYK2
Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.
   
 
 0.921
A0A1Y2AU48
Cytochrome P450; Belongs to the cytochrome P450 family.
   
 0.918
A0A1Y2CC21
Cytochrome P450; Belongs to the cytochrome P450 family.
   
 0.918
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.