A0A1Y2D3N1 protein (Rhizoclosmatium globosum)

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Score

A0A1Y2D3N1

Arf GTPase activating protein. (148 aa)

Predicted Functional Partners:

A0A1Y2CJH7

0.758

A0A1Y2CN44

0.577

A0A1Y2CN56

0.544

A0A1Y2C6G8

0.540

A0A1Y2CSJ5

0.540

A0A1Y2CSR1

0.540

A0A1Y2CHZ8

0.441

A0A1Y2BSG9

0.424

A0A1Y2CTD6

0.424

A0A1Y2D3J5

0.418

Your Current Organism:

Rhizoclosmatium globosum

NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y2BSG9	A0A1Y2CTD6	ENTH-domain-containing protein.	ENTH domain-containing protein.	0.775
A0A1Y2BSG9	A0A1Y2D3N1	ENTH-domain-containing protein.	Arf GTPase activating protein.	0.424
A0A1Y2C6G8	A0A1Y2CJH7	Arf-GAP domain-containing protein.	Arf GTPase activating protein.	0.731
A0A1Y2C6G8	A0A1Y2CN44	Arf-GAP domain-containing protein.	Arf GTPase activating protein.	0.676
A0A1Y2C6G8	A0A1Y2CN56	Arf-GAP domain-containing protein.	Uncharacterized protein.	0.676
A0A1Y2C6G8	A0A1Y2D3N1	Arf-GAP domain-containing protein.	Arf GTPase activating protein.	0.540
A0A1Y2CHZ8	A0A1Y2D3N1	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Arf GTPase activating protein.	0.441
A0A1Y2CJH7	A0A1Y2C6G8	Arf GTPase activating protein.	Arf-GAP domain-containing protein.	0.731
A0A1Y2CJH7	A0A1Y2CN44	Arf GTPase activating protein.	Arf GTPase activating protein.	0.932
A0A1Y2CJH7	A0A1Y2CN56	Arf GTPase activating protein.	Uncharacterized protein.	0.931
A0A1Y2CJH7	A0A1Y2CSJ5	Arf GTPase activating protein.	VASt domain-containing protein.	0.731
A0A1Y2CJH7	A0A1Y2CSR1	Arf GTPase activating protein.	PH-domain-containing protein.	0.731
A0A1Y2CJH7	A0A1Y2D3N1	Arf GTPase activating protein.	Arf GTPase activating protein.	0.758
A0A1Y2CN44	A0A1Y2C6G8	Arf GTPase activating protein.	Arf-GAP domain-containing protein.	0.676
A0A1Y2CN44	A0A1Y2CJH7	Arf GTPase activating protein.	Arf GTPase activating protein.	0.932
A0A1Y2CN44	A0A1Y2CN56	Arf GTPase activating protein.	Uncharacterized protein.	0.779
A0A1Y2CN44	A0A1Y2CSJ5	Arf GTPase activating protein.	VASt domain-containing protein.	0.676
A0A1Y2CN44	A0A1Y2CSR1	Arf GTPase activating protein.	PH-domain-containing protein.	0.676
A0A1Y2CN44	A0A1Y2D3N1	Arf GTPase activating protein.	Arf GTPase activating protein.	0.577
A0A1Y2CN56	A0A1Y2C6G8	Uncharacterized protein.	Arf-GAP domain-containing protein.	0.676

page 1 of 3

Network Stats

number of nodes:

11

number of edges:

41

average node degree:

7.45

avg. local clustering coefficient:

0.812

expected number of edges:

22

PPI enrichment p-value:

0.000281

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009084

Glutamine family amino acid biosynthetic process

6 of 14

2.03

3.56

1.15e-08

GO:0009064

Glutamine family amino acid metabolic process

7 of 26

1.83

3.28

5.73e-09

GO:1901605

Alpha-amino acid metabolic process

8 of 68

1.47

2.35

1.15e-08

GO:1901607

Alpha-amino acid biosynthetic process

7 of 52

1.53

2.33

8.86e-08

GO:0006541

Glutamine metabolic process

4 of 14

1.85

2.07

3.42e-05

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016639

Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor

3 of 3

2.4

1.75

0.00053

GO:0016879

Ligase activity, forming carbon-nitrogen bonds

4 of 40

1.4

1.05

0.0032

GO:0004356

Glutamate-ammonia ligase activity

2 of 2

2.4

1.04

0.0123

GO:0004355

Glutamate synthase (NADPH) activity

2 of 2

2.4

1.04

0.0123

GO:0005488

Binding

10 of 1114

0.35

0.26

0.0403

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005622

Intracellular anatomical structure

10 of 1013

0.39

0.27

0.0397

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1753

Glutamine family amino acid biosynthetic process, and Alanine, aspartate and glutamate metabolism

5 of 19

1.82

2.26

8.69e-06

CL:1754

Mixed, incl. Nitrogen metabolism, and Carbapenem biosynthesis

4 of 12

1.92

2.11

3.70e-05

CL:1757

Oxidoreductase activity, acting on the CH-NH2 group of donors, and Aminotransferase class I and II

3 of 5

2.18

1.85

0.00027

CL:1691

Alpha-amino acid biosynthetic process, and Cysteine and methionine metabolism

6 of 50

1.48

1.82

8.69e-06

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00250

Alanine, aspartate and glutamate metabolism

8 of 26

1.89

4.28

3.92e-12

map00910

Nitrogen metabolism

5 of 7

2.25

3.82

1.51e-08

map00220

Arginine biosynthesis

4 of 11

1.96

2.43

6.76e-06

map01230

Biosynthesis of amino acids

6 of 149

1.0

0.92

0.00029

map00630

Glyoxylate and dicarboxylate metabolism

2 of 17

1.47

0.69

0.0377

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM01230

Glutamine synthetase, catalytic domain

2 of 2

2.4

1.13

0.0085

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