STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2D3R5Velvet domain-containing protein. (260 aa)    
Predicted Functional Partners:
A0A1Y2BSU3
Uncharacterized protein.
    
  0.598
A0A1Y2CRE0
Translational machinery component.
    
  0.592
A0A1Y2BXJ0
Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.
   
  0.587
A0A1Y2CSN9
Ribosomal protein S16.
   
  0.584
A0A1Y2BX59
Ribosomal protein S5 domain 2-like protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.582
A0A1Y2C7U9
Uncharacterized protein.
   
  0.581
A0A1Y2BMI0
MRP-S28 domain-containing protein.
    
  0.575
A0A1Y2BNJ2
Uncharacterized protein.
    
  0.575
A0A1Y2BX57
Ribosomal_S10 domain-containing protein.
    
  0.575
A0A1Y2CIW3
Glucocorticoid receptor-like (DNA-binding domain).
    
  0.575
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.