STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX03173.1Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase. (554 aa)    
Predicted Functional Partners:
SCX03184.1
Hypothetical protein.
 
     0.954
SCX03199.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
     0.953
SCX03188.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.951
SCX03178.1
All-trans-retinol 13,14-reductase.
 
     0.949
SCX03166.1
phenylacetate-CoA ligase.
 
     0.948
SCX03195.1
Hypothetical protein.
 
     0.911
SCX03215.1
Outer membrane lipoprotein carrier protein.
 
     0.909
SCX03227.1
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.909
SCX03210.1
Hypothetical protein.
 
     0.900
SCX03204.1
Outer membrane protein beta-barrel domain-containing protein.
 
     0.828
Your Current Organism:
Flavobacterium saliperosum
NCBI taxonomy Id: 329186
Other names: AS 1.3801, CGMCC 1.3801, F. saliperosum, Flavobacterium saliperosum Wang et al. 2006 emend. Dong et al. 2013, Flavobacterium saliperosum Wang et al. 2006 emend. Hahnke et al. 2016, JCM 13331, strain S13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.