Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX01055.1 | SCX05477.1 | SAMN02927925_00259 | SAMN02927925_00828 | GLPGLI family protein. | Acyl-ACP thioesterase. | 0.435 |
SCX01055.1 | SCX06593.1 | SAMN02927925_00259 | SAMN02927925_01028 | GLPGLI family protein. | Nucleotide-binding universal stress protein, UspA family. | 0.550 |
SCX01055.1 | SCX06599.1 | SAMN02927925_00259 | SAMN02927925_01029 | GLPGLI family protein. | Nucleotide-binding universal stress protein, UspA family. | 0.574 |
SCX05470.1 | SCX05474.1 | SAMN02927925_00826 | SAMN02927925_00827 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SCX05470.1 | SCX05477.1 | SAMN02927925_00826 | SAMN02927925_00828 | Hypothetical protein. | Acyl-ACP thioesterase. | 0.598 |
SCX05470.1 | SCX05484.1 | SAMN02927925_00826 | SAMN02927925_00829 | Hypothetical protein. | Hypothetical protein. | 0.575 |
SCX05470.1 | SCX05492.1 | SAMN02927925_00826 | SAMN02927925_00831 | Hypothetical protein. | Voltage-gated potassium channel. | 0.575 |
SCX05470.1 | miaA | SAMN02927925_00826 | SAMN02927925_00830 | Hypothetical protein. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.575 |
SCX05474.1 | SCX05470.1 | SAMN02927925_00827 | SAMN02927925_00826 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SCX05474.1 | SCX05477.1 | SAMN02927925_00827 | SAMN02927925_00828 | Hypothetical protein. | Acyl-ACP thioesterase. | 0.598 |
SCX05474.1 | SCX05484.1 | SAMN02927925_00827 | SAMN02927925_00829 | Hypothetical protein. | Hypothetical protein. | 0.575 |
SCX05474.1 | SCX05492.1 | SAMN02927925_00827 | SAMN02927925_00831 | Hypothetical protein. | Voltage-gated potassium channel. | 0.575 |
SCX05474.1 | miaA | SAMN02927925_00827 | SAMN02927925_00830 | Hypothetical protein. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.575 |
SCX05477.1 | SCX01055.1 | SAMN02927925_00828 | SAMN02927925_00259 | Acyl-ACP thioesterase. | GLPGLI family protein. | 0.435 |
SCX05477.1 | SCX05470.1 | SAMN02927925_00828 | SAMN02927925_00826 | Acyl-ACP thioesterase. | Hypothetical protein. | 0.598 |
SCX05477.1 | SCX05474.1 | SAMN02927925_00828 | SAMN02927925_00827 | Acyl-ACP thioesterase. | Hypothetical protein. | 0.598 |
SCX05477.1 | SCX05484.1 | SAMN02927925_00828 | SAMN02927925_00829 | Acyl-ACP thioesterase. | Hypothetical protein. | 0.741 |
SCX05477.1 | SCX05492.1 | SAMN02927925_00828 | SAMN02927925_00831 | Acyl-ACP thioesterase. | Voltage-gated potassium channel. | 0.748 |
SCX05477.1 | SCX05497.1 | SAMN02927925_00828 | SAMN02927925_00832 | Acyl-ACP thioesterase. | DNA polymerase-3 subunit epsilon. | 0.506 |
SCX05477.1 | SCX06593.1 | SAMN02927925_00828 | SAMN02927925_01028 | Acyl-ACP thioesterase. | Nucleotide-binding universal stress protein, UspA family. | 0.511 |
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