STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX08040.1Hypothetical protein. (291 aa)    
Predicted Functional Partners:
SCW99803.1
Protein of unknown function.
  
     0.741
SCX14657.1
Putative MetA-pathway of phenol degradation.
  
     0.708
SCX17034.1
Hypothetical protein.
  
     0.677
SCX10871.1
Hypothetical protein.
  
     0.647
SCX04925.1
Hypothetical protein.
  
     0.590
SCX05773.1
Hypothetical protein.
  
     0.577
SCX10929.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.571
SCX02824.1
Protein of unknown function.
 
     0.552
SCX08044.1
Formiminoglutamase; Belongs to the arginase family.
       0.543
SCX14748.1
Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase.
   
    0.540
Your Current Organism:
Flavobacterium saliperosum
NCBI taxonomy Id: 329186
Other names: AS 1.3801, CGMCC 1.3801, F. saliperosum, Flavobacterium saliperosum Wang et al. 2006 emend. Dong et al. 2013, Flavobacterium saliperosum Wang et al. 2006 emend. Hahnke et al. 2016, JCM 13331, strain S13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.