STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX14825.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
SCX14819.1
Hypothetical protein.
       0.542
SCX14832.1
TIGR02757 family protein.
       0.539
lolD-2
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
       0.437
SCX14815.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.421
SCX14804.1
Outer membrane protein TolC.
       0.416
SCX14809.1
Heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.416
Your Current Organism:
Flavobacterium saliperosum
NCBI taxonomy Id: 329186
Other names: AS 1.3801, CGMCC 1.3801, F. saliperosum, Flavobacterium saliperosum Wang et al. 2006 emend. Dong et al. 2013, Flavobacterium saliperosum Wang et al. 2006 emend. Hahnke et al. 2016, JCM 13331, strain S13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.