STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX15065.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (325 aa)    
Predicted Functional Partners:
SCX15071.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.998
SCX15075.1
phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.
 
 0.998
SCX09086.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.983
SCX09081.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.975
SCX07873.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
  
  0.922
SCX03488.1
Chemotaxis protein MotB.
   
   0.589
SCX18280.1
Chemotaxis protein MotB.
   
   0.589
SCX05781.1
Lipoprotein-releasing system permease protein.
  
     0.503
SCX07999.1
Uncharacterized membrane protein YphA, DoxX/SURF4 family.
  
     0.496
SCX15080.1
Helix-turn-helix domain-containing protein.
       0.484
Your Current Organism:
Flavobacterium saliperosum
NCBI taxonomy Id: 329186
Other names: AS 1.3801, CGMCC 1.3801, F. saliperosum, Flavobacterium saliperosum Wang et al. 2006 emend. Dong et al. 2013, Flavobacterium saliperosum Wang et al. 2006 emend. Hahnke et al. 2016, JCM 13331, strain S13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.