Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX09844.1 | SCX17925.1 | SAMN02927925_01457 | SAMN02927925_02613 | Hypothetical protein. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.570 |
SCX09844.1 | SCX17944.1 | SAMN02927925_01457 | SAMN02927925_02617 | Hypothetical protein. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.773 |
SCX09844.1 | hemA | SAMN02927925_01457 | SAMN02927925_02612 | Hypothetical protein. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.705 |
SCX11091.1 | SCX17925.1 | SAMN02927925_01697 | SAMN02927925_02613 | Spore coat polysaccharide biosynthesis protein SpsF. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.776 |
SCX11091.1 | SCX17944.1 | SAMN02927925_01697 | SAMN02927925_02617 | Spore coat polysaccharide biosynthesis protein SpsF. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.937 |
SCX11091.1 | hemA | SAMN02927925_01697 | SAMN02927925_02612 | Spore coat polysaccharide biosynthesis protein SpsF. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.919 |
SCX11091.1 | hemL | SAMN02927925_01697 | SAMN02927925_00273 | Spore coat polysaccharide biosynthesis protein SpsF. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.503 |
SCX17914.1 | SCX17925.1 | SAMN02927925_02611 | SAMN02927925_02613 | AraC-type DNA-binding protein. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.538 |
SCX17914.1 | SCX17930.1 | SAMN02927925_02611 | SAMN02927925_02614 | AraC-type DNA-binding protein. | uroporphyrinogen-III synthase. | 0.590 |
SCX17914.1 | hemA | SAMN02927925_02611 | SAMN02927925_02612 | AraC-type DNA-binding protein. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.616 |
SCX17914.1 | hemE | SAMN02927925_02611 | SAMN02927925_02615 | AraC-type DNA-binding protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.460 |
SCX17925.1 | SCX09844.1 | SAMN02927925_02613 | SAMN02927925_01457 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Hypothetical protein. | 0.570 |
SCX17925.1 | SCX11091.1 | SAMN02927925_02613 | SAMN02927925_01697 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Spore coat polysaccharide biosynthesis protein SpsF. | 0.776 |
SCX17925.1 | SCX17914.1 | SAMN02927925_02613 | SAMN02927925_02611 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | AraC-type DNA-binding protein. | 0.538 |
SCX17925.1 | SCX17930.1 | SAMN02927925_02613 | SAMN02927925_02614 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | uroporphyrinogen-III synthase. | 0.999 |
SCX17925.1 | SCX17938.1 | SAMN02927925_02613 | SAMN02927925_02616 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Coproporphyrinogen oxidase. | 0.731 |
SCX17925.1 | SCX17944.1 | SAMN02927925_02613 | SAMN02927925_02617 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.997 |
SCX17925.1 | hemA | SAMN02927925_02613 | SAMN02927925_02612 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.995 |
SCX17925.1 | hemE | SAMN02927925_02613 | SAMN02927925_02615 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.996 |
SCX17925.1 | hemL | SAMN02927925_02613 | SAMN02927925_00273 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.899 |
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