STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_0048GAF domain protein. (810 aa)    
Predicted Functional Partners:
AM1_5080
Conserved hypothetical protein.
 
 0.942
AM1_5081
Conserved hypothetical protein.
 
 0.941
AM1_1378
Methyl-accepting chemotaxis protein with GAF domain, putative.
 
 
0.932
AM1_0912
Methyl-accepting chemotaxis signaling protein, putative.
 
 
 0.930
AM1_3740
Methyl-accepting chemotaxis protein, putative.
 
 
 0.920
AM1_5892
Chemotaxis response regulator, putative.
  
 
 0.920
AM1_1098
Response regulator receiver, putative.
  
 0.918
AM1_1101
Chemotaxis histidine kinase, putative.
 
 
 0.899
AM1_0913
CheA signal transduction histidine kinase.
 
 
 0.880
AM1_5077
CheA signal transduction histidine kinase.
 
 
 0.870
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.