STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_0259Hypothetical protein. (543 aa)    
Predicted Functional Partners:
AM1_2698
2-cys peroxiredoxin, putative.
  
  
 0.826
AM1_5494
Alkyl hydroperoxide reductase/Thiol specific antioxidant family protein.
  
  
 0.826
AM1_0260
Conserved hypothetical protein.
       0.592
AM1_0261
Conserved hypothetical protein.
       0.592
AM1_4910
Thioredoxin reductase, putative.
  
  
 0.500
AM1_0257
TPR domain protein, putative.
       0.486
AM1_0258
Conserved hypothetical protein.
       0.486
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
  
 0.476
AM1_2589
Hypothetical protein.
  
  
 0.458
AM1_2594
Hypothetical protein.
  
  
 0.458
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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