STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_0547Diguanylate cyclase (GGDEF domain). (443 aa)    
Predicted Functional Partners:
AM1_6069
Response regulator receiver domain protein.
 
  
 0.896
AM1_0714
EAL and cyclic nucleotide-binding domain protein.
 
 0.884
AM1_0548
Diguanylate cyclase/phosphodiesterase with GAF domain.
 
 
0.867
AM1_5637
Diguanylate cyclase (GGDEF).
 
   
0.791
AM1_3565
Serine/threonine protein kinase and signal transduction histidine kinase (STHK) with GAF and PAS/PAC sensor.
 
  
 0.716
AM1_0218
EAL domain protein.
  
 0.694
AM1_1101
Chemotaxis histidine kinase, putative.
 
  
 0.661
AM1_0016
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
0.659
AM1_2089
Phosphotransferase system, lactose/cellobiose IIC component, putative.
 
  
 0.645
AM1_3230
Two component transcriptional regulator, winged helix family.
 
  
 0.640
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.