STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_0809ABC transporter, ATP-binding protein. (222 aa)    
Predicted Functional Partners:
AM1_5362
Cobalt transport protein, putative.
 
 0.997
AM1_3653
BioY family protein.
   
 0.972
AM1_0808
Conserved hypothetical protein.
 
     0.855
AM1_1886
ABC transporter, ATP-binding protein.
  
  
 
0.850
AM1_1589
Conserved domain protein.
  
     0.695
AM1_1486
Conserved hypothetical protein.
  
     0.677
AM1_4393
Conserved hypothetical protein.
  
     0.642
AM1_4688
Containing conserved hypothetic CbiG and CobJ domain proteins.
  
  
 0.613
rpsE
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
 
    0.602
AM1_5139
Conserved hypothetical protein.
  
     0.574
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.