STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_0977DevC protein. (395 aa)    
Predicted Functional Partners:
AM1_0974
ABC transporter, ATP-binding protein.
 
 
 0.942
AM1_0978
Membrane fusion protein DevB, putative.
 
    0.936
AM1_0986
ABC transporter ATPase protein.
 
 
 0.848
AM1_1819
ABC transporter, ATP-binding protein.
 
 
 0.839
AM1_2573
DevA like ABC transporter ATPase component.
 
 
 0.839
AM1_1821
Membrane fusion protein, putative.
 
    0.828
AM1_0988
Secretion protein HlyD, putative.
 
    0.825
AM1_2571
DevB-like secretion protein, putative.
 
    0.780
AM1_0976
Hypothetical protein.
  
    0.699
AM1_0979
Transcriptional regulator, TetR family.
 
     0.699
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.