STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_1014Polar amino acid ABC transporter, permease protein, putative. (389 aa)    
Predicted Functional Partners:
AM1_1016
Polar amino acid ABC transporter, ATP-binding protein.
 
 
 0.995
AM1_1015
Polar amino acid ABC transporter, permease protein.
 
 
0.990
AM1_5624
Lysine-arginine-ornithine-binding periplasmic protein, putative; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.969
AM1_1553
Extracellular solute-binding protein, family 3.
 
  
 0.732
AM1_1013
polyA polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.572
AM1_1012
Hypothetical protein.
       0.564
psbZ
Photosystem II protein PsbZ; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family.
       0.429
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.