STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_1229Transcriptional regulator, TetR family. (193 aa)    
Predicted Functional Partners:
AM1_1231
Pyridoxamine 5'-phosphate oxidase.
 
     0.592
AM1_1230
Glutathione S-transferase; Belongs to the GST superfamily.
       0.538
AM1_3132
Transcriptional regulator, TetR family, putative.
  
     0.516
AM1_6099
Transcriptional regulator, TetR family, putative.
  
     0.442
AM1_1228
Hypothetical protein.
   
   0.423
AM1_6114
Transcriptional regulator, TetR family.
  
     0.409
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.