STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_1301Hypothetical protein. (318 aa)    
Predicted Functional Partners:
AM1_1300
Hypothetical protein.
       0.773
AM1_0148
Hypothetical protein.
  
 
 0.516
AM1_2429
Outer membrane efflux protein.
  
 
 0.516
AM1_5448
Outer membrane efflux protein.
  
 
 0.516
AM1_0471
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.451
AM1_1767
RND multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.451
AM1_2480
Multidrug resistance protein, putative; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.451
AM1_2542
Acriflavin resistance protein, putative; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.451
AM1_6139
Hydrophobe/amphiphile Efflux-1 (HAE1) Family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.451
AM1_0647
ABC transporter, permease protein.
  
 
 0.418
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.