STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_1380Ferredoxin-thioredoxin reductase variable alpha chain. (73 aa)    
Predicted Functional Partners:
AM1_4031
Ferredoxin-thioredoxin reductase catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
 
 
 0.994
AM1_5442
Ferredoxin, 2Fe-2S type.
    
   0.863
petF1
Ferredoxin, 2Fe-2S type, PetF1.
    
   0.863
AM1_3328
Conserved hypothetical protein.
  
     0.764
AM1_6341
Conserved hypothetical protein.
  
     0.755
AM1_5141
Ferredoxin, 2Fe-2S type.
    
   0.747
AM1_4129
Conserved hypothetical protein.
  
     0.746
AM1_5139
Conserved hypothetical protein.
  
     0.726
AM1_5347
Conserved hypothetical protein.
  
     0.724
ndhL
Conserved domain protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.718
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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