Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AM1_1900 | AM1_1901 | Glycosyl transferase, group 1 family protein, putative. | Methyltransferase, putative. | 0.511 |
AM1_1900 | AM1_1902 | Glycosyl transferase, group 1 family protein, putative. | Hypothetical protein. | 0.495 |
AM1_1900 | AM1_1903 | Glycosyl transferase, group 1 family protein, putative. | Conserved hypothetical protein. | 0.516 |
AM1_1901 | AM1_1900 | Methyltransferase, putative. | Glycosyl transferase, group 1 family protein, putative. | 0.511 |
AM1_1901 | AM1_1902 | Methyltransferase, putative. | Hypothetical protein. | 0.746 |
AM1_1901 | AM1_1903 | Methyltransferase, putative. | Conserved hypothetical protein. | 0.655 |
AM1_1901 | AM1_1906 | Methyltransferase, putative. | Group 1 glycosyltransferase, putative. | 0.503 |
AM1_1901 | AM1_5715 | Methyltransferase, putative. | Glycosyl transferase, group 1 family protein. | 0.479 |
AM1_1902 | AM1_1900 | Hypothetical protein. | Glycosyl transferase, group 1 family protein, putative. | 0.495 |
AM1_1902 | AM1_1901 | Hypothetical protein. | Methyltransferase, putative. | 0.746 |
AM1_1902 | AM1_1903 | Hypothetical protein. | Conserved hypothetical protein. | 0.678 |
AM1_1903 | AM1_1900 | Conserved hypothetical protein. | Glycosyl transferase, group 1 family protein, putative. | 0.516 |
AM1_1903 | AM1_1901 | Conserved hypothetical protein. | Methyltransferase, putative. | 0.655 |
AM1_1903 | AM1_1902 | Conserved hypothetical protein. | Hypothetical protein. | 0.678 |
AM1_1906 | AM1_1901 | Group 1 glycosyltransferase, putative. | Methyltransferase, putative. | 0.503 |
AM1_5715 | AM1_1901 | Glycosyl transferase, group 1 family protein. | Methyltransferase, putative. | 0.479 |