Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AM1_1925Conserved hypothetical protein. (86 aa)    
Predicted Functional Partners:
AM1_1926
Conserved hypothetical protein.
 
     0.948
AM1_1924
ADP-ribosylglycohydrolase.
       0.645
AM1_4785
FdxN element excision controlling factor protein, putative.
  
     0.627
AM1_4783
FdxN element excision controlling factor protein, putative.
  
     0.599
AM1_4316
Conserved domain protein.
  
     0.572
AM1_4778
Addiction module toxin, RelE/StbE family, putative.
  
     0.549
AM1_2949
Conserved hypothetical protein.
  
     0.505
AM1_6129
Conserved hypothetical protein.
  
     0.466
AM1_1927
Transposase.
       0.460
AM1_3048
WD-repeat protein.
  
     0.455
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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