STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_2009Sirohydrochlorin cobaltochelatase (CbiX); Cobalamin (vitamin B12) biosynthesis CbiX protein. (336 aa)    
Predicted Functional Partners:
cobF
S-adenosyl-methionine: precorrin-2 methyltransferase, gene cbiL or cobF; Belongs to the precorrin methyltransferase family.
 
  
 0.979
AM1_4365
Cobalamin biosynthesis CbiX protein, putative.
  
  
 0.960
AM1_3664
precorrin-8X methylmutase CbiC/CobH.
   
 0.950
AM1_4688
Containing conserved hypothetic CbiG and CobJ domain proteins.
   
 0.914
cysG
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.902
AM1_3665
Precorrin-6y C5,15-methyltransferase (decarboxylating)containing conserved CbiE and CbiT domains.
 
   
 0.849
cobK
Precorrin-6x reductase.
 
   
 0.736
AM1_4654
Putative fusion protein of Uroporphyrinogen-III methylase (CobA) and Uroporphyrinogen-III synthase (HemD); Belongs to the precorrin methyltransferase family.
 
  
 0.716
AM1_1886
ABC transporter, ATP-binding protein.
    
 0.600
cbiD
Cobalamin biosynthesis protein, putative; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
   
 0.598
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.