STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_2084Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative. (584 aa)    
Predicted Functional Partners:
AM1_2944
Peptide ABC transporter, permease protein.
 
 0.986
AM1_1985
Oligopeptide ABC transporter, permease protein, putative.
 0.985
AM1_0944
Peptide ABC transporter, permease subunit, putative.
 
 0.984
dppB
Dipeptide/oligopeptide/nickel ABC transporter, permease protein DppB.
 
 0.984
AM1_2080
Oligopeptide ABC transporter permease protein, putative.
 
 0.982
AM1_3956
Oligopeptide ABC transporter periplasmic substrate-binding protein.
  
  
  0.974
AM1_1362
ABC transporter, ATP-binding protein; Putative oligopeptide transporter; Belongs to the ABC transporter superfamily.
 
 
 0.971
AM1_2299
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.968
AM1_4651
Dipeptide ABC transporter, dipeptide-binding protein.
  
  
 
0.929
appC
Oligopeptide transport system permease protein AppC, putative.
 
 0.844
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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