STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_2200Glycosyl transferase, group 1, putative. (411 aa)    
Predicted Functional Partners:
AM1_2202
Acyltransferase.
       0.559
AM1_1918
Hypothetical protein.
 
    0.554
AM1_0991
Glycosyl transferase, family 2:TPR repeat; Contains both glycosyl transferase domain and tetratricopeptide repeat domain.
 
   0.507
AM1_2199
Acyltransferase family protein.
       0.466
AM1_2468
Glycosyl transferase, group 1.
  
     0.463
AM1_3608
Glycosyl transferase, group 1.
  
     0.442
AM1_4134
Hypothetical protein.
  
     0.438
AM1_5547
Glycosyl transferase, group 1 family protein.
  
     0.419
AM1_3613
Conserved hypothetical protein.
 
 
    0.415
tuaD
UDP-glucose 6-dehydrogenase.
 
  
 0.411
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.