STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_2247Conserved hypothetical protein; Similar to Anti-sigma factor. (226 aa)    
Predicted Functional Partners:
AM1_2248
OsmC family protein.
       0.773
AM1_2245
Transcriptional regulator, TetR family.
 
     0.673
AM1_2246
Oxidoreductase, short chain dehydrogenase/reductase family.
       0.661
AM1_2249
Hypothetical protein.
       0.628
AM1_3180
Conserved hypothetical protein.
  
     0.552
AM1_2657
Transcriptional regulator, TetR family.
 
     0.503
grxC-2
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
       0.470
AM1_1074
glutathione-S-transferase domain protein, putative.
  
     0.437
rpoE-3
RNA polymerase sigma-24 subunit; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 
 0.401
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.