STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_2510Haemagglutination activity domain protein. (901 aa)    
Predicted Functional Partners:
AM1_0958
Surface antigen variable number.
 
 0.825
AM1_3266
Polypeptide-transport-associated, ShlB-type.
 
 0.799
AM1_5968
TPR domain protein.
     0.776
AM1_4008
Conserved hypothetical protein.
  
     0.692
AM1_3181
PpiC-type peptidyl-prolyl cis-trans isomerase domain containing protein.
  
     0.686
AM1_4565
Protease (caspase) p20 domain containing protein.
  
     0.669
AM1_2927
Conserved hypothetical protein.
  
     0.649
AM1_2926
Conserved hypothetical protein.
 
    0.629
AM1_0432
Conserved hypothetical protein.
  
    0.626
AM1_6257
Conserved hypothetical protein.
  
     0.614
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.