Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM1_2201 | AM1_2720 | AM1_2201 | AM1_2720 | Conserved hypothetical protein. | Bacterial dynamin-like protein. | 0.727 |
AM1_2201 | AM1_3416 | AM1_2201 | AM1_3416 | Conserved hypothetical protein. | Iron ABC transporter, periplasmic iron-binding protein, putative. | 0.610 |
AM1_2201 | AM1_5971 | AM1_2201 | AM1_5971 | Conserved hypothetical protein. | Hypothetical protein. | 0.706 |
AM1_2720 | AM1_2201 | AM1_2720 | AM1_2201 | Bacterial dynamin-like protein. | Conserved hypothetical protein. | 0.727 |
AM1_2720 | AM1_2722 | AM1_2720 | AM1_2722 | Bacterial dynamin-like protein. | Hypothetical protein. | 0.493 |
AM1_2720 | AM1_3416 | AM1_2720 | AM1_3416 | Bacterial dynamin-like protein. | Iron ABC transporter, periplasmic iron-binding protein, putative. | 0.757 |
AM1_2720 | AM1_3767 | AM1_2720 | AM1_3767 | Bacterial dynamin-like protein. | tRNAHis guanylyltransferase family protein. | 0.462 |
AM1_2720 | AM1_5971 | AM1_2720 | AM1_5971 | Bacterial dynamin-like protein. | Hypothetical protein. | 0.696 |
AM1_2720 | AM1_6264 | AM1_2720 | AM1_6264 | Bacterial dynamin-like protein. | Exonuclease. | 0.518 |
AM1_2720 | AM1_6401 | AM1_2720 | AM1_6401 | Bacterial dynamin-like protein. | WD-repeat protein. | 0.482 |
AM1_2720 | cmk | AM1_2720 | AM1_2620 | Bacterial dynamin-like protein. | Pantoate ligase/cytidylate kinase fusion protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the C-terminal section; belongs to the cytidylate kinase family. Type 1 subfamily. | 0.552 |
AM1_2720 | gpsA | AM1_2720 | AM1_4768 | Bacterial dynamin-like protein. | NAD-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.699 |
AM1_2720 | typA | AM1_2720 | AM1_0067 | Bacterial dynamin-like protein. | GTP-binding protein TypA/BipA. | 0.503 |
AM1_2722 | AM1_2720 | AM1_2722 | AM1_2720 | Hypothetical protein. | Bacterial dynamin-like protein. | 0.493 |
AM1_3416 | AM1_2201 | AM1_3416 | AM1_2201 | Iron ABC transporter, periplasmic iron-binding protein, putative. | Conserved hypothetical protein. | 0.610 |
AM1_3416 | AM1_2720 | AM1_3416 | AM1_2720 | Iron ABC transporter, periplasmic iron-binding protein, putative. | Bacterial dynamin-like protein. | 0.757 |
AM1_3416 | AM1_5971 | AM1_3416 | AM1_5971 | Iron ABC transporter, periplasmic iron-binding protein, putative. | Hypothetical protein. | 0.553 |
AM1_3767 | AM1_2720 | AM1_3767 | AM1_2720 | tRNAHis guanylyltransferase family protein. | Bacterial dynamin-like protein. | 0.462 |
AM1_5971 | AM1_2201 | AM1_5971 | AM1_2201 | Hypothetical protein. | Conserved hypothetical protein. | 0.706 |
AM1_5971 | AM1_2720 | AM1_5971 | AM1_2720 | Hypothetical protein. | Bacterial dynamin-like protein. | 0.696 |
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