STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_2739TPR domain protein. (1685 aa)    
Predicted Functional Partners:
AM1_1890
Conserved hypothetical protein; Similar to Beta-xylosidase.
  
     0.617
AM1_1406
TPR domain protein.
  
 
 0.547
AM1_3111
Appr-1-p processing enzyme family protein.
 
     0.493
AM1_5710
GDSL-like lipase/acylhydrolase domain containing protein.
 
    0.477
AM1_1967
Caax prenyl protease-related protein, putative.
  
     0.460
AM1_4193
Conserved hypothetical protein; Similar transposase and inactivated derivatives.
  
     0.445
AM1_3902
Conserved hypothetical protein.
 
 
 0.426
AM1_0582
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
  
 
 0.423
AM1_2592
Conserved hypothetical protein; Similar to transposase.
  
     0.421
AM1_2397
Conserved hypothetical protein.
  
     0.411
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.