STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM1_2960Sugar ABC transporter, permease protein. (303 aa)    
Predicted Functional Partners:
AM1_2961
Sugar ABC transporter, permease protein.
 
 0.996
AM1_1478
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.979
AM1_4417
Sugar ABC transporter, permease protein, putative.
 
 0.978
AM1_5369
Sugar ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily.
 
 
 0.977
AM1_4693
Sugar ABC transporter, sugar-binding protein, putative.
 
 0.955
AM1_2958
Sugar ABC transporter, solute-binding protein, putative.
 
 0.951
AM1_5303
Sugar ABC transporter, periplasmic sugar-binding protein, putative.
 
 0.928
AM1_1738
Sugar ABC transporter, periplasmic sugar-binding protein, putative.
 
 
 0.906
AM1_0142
Alpha amylase, catalytic region.
  
 0.566
AM1_0622
Alpha amylase, catalytic region.
 
  
 0.522
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.